skip to main content


Search for: All records

Creators/Authors contains: "Squire, J."

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. With the support of hybrid-kinetic simulations and analytic theory, we describe the nonlinear behaviour of long-wavelength non-propagating (NP) modes and fast magnetosonic waves in high- $\beta$ collisionless plasmas, with particular attention to their excitation of and reaction to kinetic micro-instabilities. The perpendicularly pressure balanced polarization of NP modes produces an excess of perpendicular pressure over parallel pressure in regions where the plasma $\beta$ is increased. For mode amplitudes $|\delta B/B_0| \gtrsim 0.3$ , this excess excites the mirror instability. Particle scattering off these micro-scale mirrors frustrates the nonlinear saturation of transit-time damping, ensuring that large-amplitude NP modes continue their decay to small amplitudes. At asymptotically large wavelengths, we predict that the mirror-induced scattering will be large enough to interrupt transit-time damping entirely, isotropizing the pressure perturbations and morphing the collisionless NP mode into the magnetohydrodynamic (MHD) entropy mode. In fast waves, a fluctuating pressure anisotropy drives both mirror and firehose instabilities when the wave amplitude satisfies $|\delta B/B_0| \gtrsim 2\beta ^{-1}$ . The induced particle scattering leads to delayed shock formation and MHD-like wave dynamics. Taken alongside prior work on self-interrupting Alfvén waves and self-sustaining ion-acoustic waves, our results establish a foundation for new theories of electromagnetic turbulence in low-collisionality, high- $\beta$ plasmas such as the intracluster medium, radiatively inefficient accretion flows and the near-Earth solar wind. 
    more » « less
    Free, publicly-accessible full text available June 1, 2024
  2. Abstract Our understanding of large-scale magnetic fields in stellar radiative zones remains fragmented and incomplete. Such magnetic fields, which must be produced by some form of dynamo mechanism, are thought to dominate angular-momentum transport, making them crucial to stellar evolution. A major difficulty is the effect of stable stratification, which generally suppresses dynamo action. We explore the effects of stable stratification on mean-field dynamo theory with a particular focus on a non-helical large-scale dynamo (LSD) mechanism known as the magnetic shear-current effect. We find that the mechanism is robust to increasing stable stratification as long as the original requirements for its operation are met: a source of shear and non-helical magnetic fluctuations (e.g. from a small-scale dynamo). Both are plausibly sourced in the presence of differential rotation. Our idealized direct numerical simulations, supported by mean-field theory, demonstrate the generation of near equipartition large-scale toroidal fields. Additionally, a scan over magnetic Reynolds number shows no change in the growth or saturation of the LSD, providing good numerical evidence of a dynamo mechanism resilient to catastrophic quenching, which has been an issue for helical dynamos. These properties – the absence of catastrophic quenching and robustness to stable stratification – make the mechanism a plausible candidate for generating in situ large-scale magnetic fields in stellar radiative zones. 
    more » « less
  3. Britt, David R. (Ed.)
    Nosiheptide is a ribosomally produced and post-translationally modified thiopeptide antibiotic that displays potent antibacterial activity in vitro, especially against Grampositive pathogens. It comprises a core peptide macrocycle that contains multiple thiazole rings, dehydrated serine and threonine residues, a tri-substituted 3-hydroxypyridine ring and several other modifications. Among these additional modifications includes a 3,4-dimethyl-2-indolic acid (DMIA) moiety that bridges Glu6 and Cys8 of the core peptide to form a second smaller ring system. This side-ring system is formed by the action of NosN, a radical S-adenosylmethionine (SAM) enzyme that falls within the class C radical SAM methylase (RSMT) family. However, the true function of NosN is to transfer a methylene group from the methylmoiety of SAM to C4 of 3-methylindolic acid (MIA) attached in a thioester linkage to Cys8 of the core peptide to set up a highly electrophilic species. This species is then trapped by the side chain of Glu6, resulting in formation of a lactone and the side-ring system. The NosN reaction requires two simultaneously bound molecules of SAM. The first, SAMI, is cleaved to generate a 50-deoxyadenosyl 50-radical, which abstracts a hydrogen atom from the methyl group of the second molecule of SAM. The resulting SAM radical is believed to add to C4 of MIA, affording a radical intermediate on the MIA substrate. Herein we describe synthetic approaches that allow detection of this radical by electron paramagnetic resonance (EPR) spectroscopy. 
    more » « less
  4. Abstract

    Using a hybrid-kinetic particle-in-cell simulation, we study the evolution of an expanding, collisionless, magnetized plasma in which strong Alfvénic turbulence is persistently driven. Temperature anisotropy generated adiabatically by the plasma expansion (and consequent decrease in the mean magnetic-field strength) gradually reduces the effective elasticity of the field lines, causing reductions in the linear frequency and residual energy of the Alfvénic fluctuations. In response, these fluctuations modify their interactions and spatial anisotropy to maintain a scale-by-scale “critical balance” between their characteristic linear and nonlinear frequencies. Eventually the plasma becomes unstable to kinetic firehose instabilities, which excite rapidly growing magnetic fluctuations at ion-Larmor scales. The consequent pitch-angle scattering of particles maintains the temperature anisotropy near marginal stability, even as the turbulent plasma continues to expand. The resulting evolution of parallel and perpendicular temperatures does not satisfy double-adiabatic conservation laws, but is described accurately by a simple model that includes anomalous scattering. Our results have implications for understanding the complex interplay between macro- and microscale physics in various hot, dilute, astrophysical plasmas, and offer predictions concerning power spectra, residual energy, ion-Larmor-scale spectral breaks, and non-Maxwellian features in ion distribution functions that may be tested by measurements taken in high-beta regions of the solar wind.

     
    more » « less
  5. null (Ed.)
  6. Abstract One of the striking observations from the Parker Solar Probe (PSP) spacecraft is the prevalence in the inner heliosphere of large amplitude, Alfvénic magnetic field reversals termed switchbacks . These δ B R / B ∼  ( 1 ) fluctuations occur over a range of timescales and in patches separated by intervals of quiet, radial magnetic field. We use measurements from PSP to demonstrate that patches of switchbacks are localized within the extensions of plasma structures originating at the base of the corona. These structures are characterized by an increase in alpha particle abundance, Mach number, plasma β and pressure, and by depletions in the magnetic field magnitude and electron temperature. These intervals are in pressure balance, implying stationary spatial structure, and the field depressions are consistent with overexpanded flux tubes. The structures are asymmetric in Carrington longitude with a steeper leading edge and a small (∼1°) edge of hotter plasma and enhanced magnetic field fluctuations. Some structures contain suprathermal ions to ∼85 keV that we argue are the energetic tail of the solar wind alpha population. The structures are separated in longitude by angular scales associated with supergranulation. This suggests that these switchbacks originate near the leading edge of the diverging magnetic field funnels associated with the network magnetic field—the primary wind sources. We propose an origin of the magnetic field switchbacks, hot plasma and suprathermals, alpha particles in interchange reconnection events just above the solar transition region and our measurements represent the extended regions of a turbulent outflow exhaust. 
    more » « less